Insertion junction: CLIP2.054445_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.054445
Chromosome:chromosome 3
Location:6187123
Confidence (%):63
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00091117

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACTCGACCATAACCAGGGAGGCAGGCCCTACTGGCTGCTGCACATAGG
Internal bar code:GTTCGGATGCGCTGATTGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:541
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAACGTGCAGTGTGTTCC
Suggested primer 2:AGCACAACGACAGTAGTGGG