Insertion junction: CLIP2.054449_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054449
Chromosome:chromosome 1
Location:1018568
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g006000 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGAGCAGGTGGTGAGCGTGAGCTGACGCAGGTGCTGGGAGAGGGGGGA
Internal bar code:GTGCAAATGTCCACGATAGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:135
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCCTGCTGCGCATCATA
Suggested primer 2:TCCTCCTCATCCTCCACCTG