Insertion junction: CLIP2.054453_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054453
Chromosome:chromosome 6
Location:2757940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g271188 (1 of 12) IPR004843//IPR029052 - Calcineurin-like phosphoesterase domain, apaH type // Metallo-dependent phosphatase-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCTTACTTCCCATCCCCGCACCTCCCCACAGCCACACTTCTGCACGC
Internal bar code:TTGGGTGGTCCCAGGTGAGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:729
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTATGGCTACGACCCGG
Suggested primer 2:GTCAGGGTGATGACCAGTGG