Insertion junction: CLIP2.054457_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054457
Chromosome:chromosome 4
Location:1619141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213000 MAE12 (1 of 5) PTHR11206:SF94 - DNA-DAMAGE-INDUCIBLE PROTEIN F; MATE efflux family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAACAACACGTGCAGTCCGAAGCTAACAGCCACGGAGGTGGCCACACC
Internal bar code:CCTGCCTCACAGCGTGTCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:664
LEAP-Seq percent confirming:35.2941
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGCTTTAACACTCCCCT
Suggested primer 2:TACACTTCCGGCGATCGATG