Insertion junction: CLIP2.054467_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.054467
Chromosome:chromosome 15
Location:832317
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g640400 CLR4,OPR98,NCC2 Nuclear Control of Chloroplast 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGGTACTGTGCGGGGAGGCGCTGCGGCGGCTCCGGACACCCAAGCTC
Internal bar code:ATGTAGCGTTGCTCCCCTAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:814
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCACAACTGTGTCAAGC
Suggested primer 2:AAGCTCACCATGTACGTGCA