Insertion junction: CLIP2.054467_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054467
Chromosome:chromosome 15
Location:832339
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g640400 CLR4,OPR98,NCC2 Nuclear Control of Chloroplast 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCACCCCAGAGCCTCTAGAGCCCAGAGGCTGTTGCTGAGTGCCTGTG
Internal bar code:ATGTAGCGTTGCTCCCCTAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2495
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTCACCATGTACGTGCA
Suggested primer 2:CTGCCACAACTGTGTCAAGC