Insertion junction: CLIP2.054470_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054470
Chromosome:chromosome 12
Location:4160293
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517600 (1 of 1) K04733 - interleukin-1 receptor-associated kinase 4 (IRAK4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGAACGAGGTGCGCCTGGCCCGCAGCATCCAGCACCCGCACGTGGTG
Internal bar code:AGCCTGCTAAGTACAAGACAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1221
LEAP-Seq percent confirming:26.3158
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGTTGGCGGGCTTGATA
Suggested primer 2:TCATTCGGCTTGTGCTCACT