Insertion junction: CLIP2.054496_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054496
Chromosome:chromosome 1
Location:2907505
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g018100 (1 of 1) 3.1.3.16//3.1.3.27//3.1.3.48 - Protein-serine/threonine phosphatase / Serine/threonine specific protein phosphatase // Phosphatidylglycerophosphatase // Protein-tyrosine-phosphatase / PTPase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACATACCTTGCCCATTAATGGCGTGGACTTGCGTGCCAGCACGTCGCT
Internal bar code:TAGGGTTCCGGTGGTGAGTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1129
LEAP-Seq percent confirming:81.6327
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CTACGTCAGAGCGTTGGGTT
Suggested primer 2:CATCATGGCTGCCGATTGTG