Insertion junction: CLIP2.054497_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054497
Chromosome:chromosome 17
Location:1725488
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708450 MMP33 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCCCGCGAAGCAGCCAGCTGCCCTGCTCACCAGTGAGATCCTGGCAC
Internal bar code:ACTTGTGGTAGGCGTGTATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2933
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGGAGCCCTTTCGACTG
Suggested primer 2:GTGTTTAAGGCAGGCAACCG