Insertion junction: CLIP2.054497_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054497
Chromosome:chromosome 17
Location:1725491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708450 MMP33 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTGCTGTTGCAAGAACGTGAGTCACCGTTCTGGTATAACTCCGCTAC
Internal bar code:ATAACTGCAGCTCCGCAACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1842
LEAP-Seq percent confirming:65.3846
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTTAAGGCAGGCAACCG
Suggested primer 2:ATGTGGAGCCCTTTCGACTG