Insertion junction: CLIP2.054498_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054498
Chromosome:chromosome 13
Location:1241871
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g570400 (1 of 3) 3.1.1.14 - Chlorophyllase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCTTTCCTCCTATCACCGCGTTCGCCGCCTTCCAATGCAAGACAAACA
Internal bar code:CATCTCGCGTTTTAGGAGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:927
LEAP-Seq percent confirming:87.0968
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACACACATGCATGCACA
Suggested primer 2:CCATTCTGGACATGGCCACT