Insertion junction: CLIP2.054502_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054502
Chromosome:chromosome 3
Location:8672685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g209393 (1 of 2) K05894 - 12-oxophytodienoic acid reductase (OPR) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGGCCAACCCTGACTTCCACAAGCGCGTCCTGCTGGGCGCCCCCCTC
Internal bar code:AGAAATTAGTGGCAATCTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1456
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACCCGTATCCCTGCAAC
Suggested primer 2:CTCAGCCCCTTCACGAACTT