Insertion junction: CLIP2.054510_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054510
Chromosome:plastome
Location:148968
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802322 icreI,341940450,I-CreI (1 of 2) PF00961 - LAGLIDADG endonuclease (LAGLIDADG_1); DNA endonuclease I-CreI CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATATTTTGTATTCATAAGATGTTTTATTTAATTTATTGAATTATTAAAC
Internal bar code:CTCTGCCATAAAAATAGGACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:56
LEAP-Seq percent confirming:4.34783
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGGGTAATTAGAGCCGTC
Suggested primer 2:TGGCATGTCCTTTCAGGTCC