Insertion junction: CLIP2.054511_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054511
Chromosome:chromosome 3
Location:8749887
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g208049 (1 of 1) IPR000104//IPR000644//IPR007263 - Antifreeze protein, type I // CBS domain // Protein of unknown function DUF393 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAAGACAGTGTATGCGATGCAGCAAAGCGACGGTTTACGGATTTTACC
Internal bar code:GAAGCCCCCGTTGTGCGTTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:294
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTCAGTGCGTCCTGAACC
Suggested primer 2:ATCACGATCGGCCCATACAC