Insertion junction: CLIP2.054511_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054511
Chromosome:chromosome 3
Location:8749891
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g208049 (1 of 1) IPR000104//IPR000644//IPR007263 - Antifreeze protein, type I // CBS domain // Protein of unknown function DUF393 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTTTCCTTGTGCTCTTTAACACACATGCGCGCGCGCAATCCCCGGGCT
Internal bar code:GTGTACTCCGCGTTGAAATTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4289
LEAP-Seq percent confirming:82.6087
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:ATCACGATCGGCCCATACAC
Suggested primer 2:TCTTCAGTGCGTCCTGAACC