Insertion junction: CLIP2.054519_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054519
Chromosome:chromosome 7
Location:591429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316650 (1 of 1) PF00069//PF03924//PF07714 - Protein kinase domain (Pkinase) // CHASE domain (CHASE) // Protein tyrosine kinase (Pkinase_Tyr) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCAGTGCGCCTGCCCCTGTCAGCACAAACACCCACGCCCCTTGAGGG
Internal bar code:GTCGCTACGATGATGGCCGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1237
LEAP-Seq percent confirming:47.0588
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GATTCCCTGCACTGGTCACA
Suggested primer 2:TCGCAGAGCTCTCTCTCACT