Insertion junction: CLIP2.054526_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054526
Chromosome:chromosome 6
Location:7758679
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g303000 (1 of 24) IPR006553 - Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCGGAGAGAGAGGGGATCAAGGGCGTGAGCAGGCGAGCAGGCCTCAAA
Internal bar code:TCGAATGAACTTTAGGCACACA

Confirmation - LEAP-Seq

LEAP-Seq distance:59
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGACTTAGAGAGCGCGAG
Suggested primer 2:AGGAAATGACGACCAGGCAG