Insertion junction: CLIP2.054528_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.054528
Chromosome:chromosome 14
Location:3461394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630400 L-galactose dehydrogenase; (1 of 1) 1.1.1.316 - L-galactose 1-dehydrogenase / L-galDH intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCCTGCCCCCCGTCCCCCCTCCCCAGCGCCTCCTTCCCTCCCTCCT
Internal bar code:GCGTGTACACCGCTGGGTGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:132
LEAP-Seq percent confirming:15.625
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCCCACCTCCCTCTCATC
Suggested primer 2:TGGAGTTGAAGTCGACGGTG