Insertion junction: CLIP2.054532_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054532
Chromosome:chromosome 10
Location:2124942
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g433200 UAPA4,UAPA3,XUV3 Xanthine/uracil/vitamin C permease-like; (1 of 4) PTHR11119//PTHR11119:SF36 - XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCTGGTAGTTGGTCACGGCGGCGATGAAGTAGCCAAACAGCAGCGCC
Internal bar code:GTGCGTATAGTTTTAGGTTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2979
LEAP-Seq percent confirming:2.08333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGACGAGCGATCTAACG
Suggested primer 2:CACGGTCTCAATGGACGTGA