Insertion junction: CLIP2.054533_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054533
Chromosome:chromosome 3
Location:4279199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00065786

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACAGCACCCCGCTGGAACGCAACCCACACAACCCGCCCGGAATGTGT
Internal bar code:CAAGACTCCTGGACTCTTTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1751
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGTTGCTGTTCTGCTGGG
Suggested primer 2:GCCCTTTACTCGCATGCATG