Insertion junction: CLIP2.054541_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054541
Chromosome:chromosome 16
Location:6091827
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677550 CYA15 (1 of 8) PF00211//PF01547 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // Bacterial extracellular solute-binding protein (SBP_bac_1); Solute-binding protein-like adenylate cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTTGTGAGTGCAGGAAGAAACCGAGCTTCAGTCAGAGCTACGGGCACG
Internal bar code:ATTGACAATTCAGCCTTGACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1088
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTTGTCGTCGTCCTCAG
Suggested primer 2:GACTTTGACGAGCTGTGGGA