Insertion junction: CLIP2.054541_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054541
Chromosome:chromosome 16
Location:6091835
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677550 CYA15 (1 of 8) PF00211//PF01547 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // Bacterial extracellular solute-binding protein (SBP_bac_1); Solute-binding protein-like adenylate cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAAGCAATAAGGGCAGGTACACAGGCAGATCCATGAGCCGCGTTAGTG
Internal bar code:ATTGACAATTCAGCCTTGACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5630
LEAP-Seq percent confirming:77.4194
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTTGACGAGCTGTGGGA
Suggested primer 2:AAGCTTGTCGTCGTCCTCAG