Insertion junction: CLIP2.054546_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054546
Chromosome:chromosome 12
Location:8449471
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549950 (1 of 1) IPR007305//IPR011691//IPR020846 - Vesicle transport protein, Got1/SFT2-like // Vesicle transport protein, SFT2-like // Major facilitator superfamily domain; SFT2-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTAAATCCGTGCGACCAAAGGCCGAAGGGCCAGCTTCCACAACATAAG
Internal bar code:TGGGGTTGTAGGTGAGAGAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:870
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTCCTACCTCCATCCCCC
Suggested primer 2:CGGCGAGGTTTTCAAAGCAA