Insertion junction: CLIP2.054546_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054546
Chromosome:chromosome 12
Location:8449492
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549950 (1 of 1) IPR007305//IPR011691//IPR020846 - Vesicle transport protein, Got1/SFT2-like // Vesicle transport protein, SFT2-like // Major facilitator superfamily domain; SFT2-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTGGTGTATGTCGTTCAGTATGTGCCAGACCACGCGTGCACTCACCA
Internal bar code:GGTGCATGTGCTACGTCAAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1688
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCGAGGTTTTCAAAGCAA
Suggested primer 2:AAGTCCTACCTCCATCCCCC