Insertion junction: CLIP2.054550_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054550
Chromosome:chromosome 12
Location:240068
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485100 FAP326 Flagellar Associated Protein 326; (1 of 2) PTHR20899//PTHR20899:SF1 - UNCHARACTERIZED // UPF0691 PROTEIN C9ORF116 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCGCACCAACTTGACCGCACCCGCCAAAGAGCCGCCGGCCATAGTGC
Internal bar code:GCTATGTTTAATTGGTCTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3939
LEAP-Seq percent confirming:76.3158
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GATGTATCTGCGAGGGCGAA
Suggested primer 2:CCCTAGTTCTGCTTGTGGGG