Insertion junction: CLIP2.054556_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054556
Chromosome:chromosome 16
Location:2706319
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661850 (1 of 2) PF08332 - Calcium/calmodulin dependent protein kinase II association domain (CaMKII_AD) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCGACTACTTCGACCACTTCCTGCCCAAGGGCCCCGTGGGCGCCATTG
Internal bar code:CCTCGGGTGTGAGTGAGGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:711
LEAP-Seq percent confirming:71.875
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGTCCTCAATCTCGGCGG
Suggested primer 2:GCAATCTCAGTCGCGGTTTC