Insertion junction: CLIP2.054558_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054558
Chromosome:chromosome 16
Location:1157726
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650300 HTR39,HTR25 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCTCACCGCTACCGCCCCGGAACCGTGGCGCTGCGCGAGATTCGCAAG
Internal bar code:GTCATGGTTTGAGGCAGCTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1227
LEAP-Seq percent confirming:16.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATACGCCATGTCAGCTG
Suggested primer 2:TGTGTAAGTGACCGAGTCGC