Insertion junction: CLIP2.054564_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.054564
Chromosome:chromosome 3
Location:5611312
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185850 CPK2 (1 of 1) PTHR10584//PTHR10584:SF162 - SUGAR KINASE // SUBFAMILY NOT NAMED; putative carbohydrate kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATCAGGCCGATGTCCCATGCAGGGGCTTCCGGCGAAGCTAGAAGCCGG
Internal bar code:AGGCGCTCAATCTTCATTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:525
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CATACTTTCGCAGCGTGTCG
Suggested primer 2:GACGCTGGGTTTGGGAAAAC