Insertion junction: CLIP2.054564_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054564
Chromosome:chromosome 3
Location:5611323
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185850 CPK2 (1 of 1) PTHR10584//PTHR10584:SF162 - SUGAR KINASE // SUBFAMILY NOT NAMED; putative carbohydrate kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACCAGTCCCCGAAGGAAGCGAAGTTTTCAAAGTGGGCCTGGCGTCCC
Internal bar code:AGGCGCTCAATCTTCATTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1386
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GACGCTGGGTTTGGGAAAAC
Suggested primer 2:CATACTTTCGCAGCGTGTCG