Insertion junction: CLIP2.054573_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054573
Chromosome:chromosome 2
Location:6956361
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389245 (1 of 1) PTHR24078//PTHR24078:SF205 - DNAJ HOMOLOG SUBFAMILY C MEMBER // DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGCAACGGGGATGGAGCCGCGTGCCCGAGCGCCTGACGCCGGCTGCC
Internal bar code:GGGCTAGGCTAGAGATTCCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3398
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGTGACACAGGTTCGAG
Suggested primer 2:TGCAGTCTGTAAGCCTCAGC