Insertion junction: CLIP2.054583_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054583
Chromosome:chromosome 7
Location:471046
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g315500 (1 of 8) IPR001810//IPR006553 - F-box domain // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGAATGGGGTTCAGGGAGGGGTTCGTGGGTATGGGATGTGAGCCCCGT
Internal bar code:CCTTTTCTAACCTACATTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:423
LEAP-Seq percent confirming:55.1724
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GTGATGGTGGTGATCGTGGT
Suggested primer 2:ACAACTGCAACTTGACCCCA