Insertion junction: CLIP2.054587_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054587
Chromosome:chromosome 6
Location:1512602
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g260700 XUV1,UAPA6 (1 of 2) K06901 - putative MFS transporter, AGZA family, xanthine/uracil permease (pbuG); Xanthine/uracil/vitamin C permease-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTTCCGTTTCCCACTCCGCTGCTGTTGCATCACTTCTGCTGCTAGCT
Internal bar code:TTTGGAGGATGTTCCCCGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1890
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCTGCACAACCTTCTTG
Suggested primer 2:CGGCAAGATCACGCAGATTG