Insertion junction: CLIP2.054591_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.054591
Chromosome:chromosome 10
Location:2417506
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435200 (1 of 4) IPR000533 - Tropomyosin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAGACCCGGATAACAGTGCCTGGGCGCTTTGTGCCTGGCATCCCACC
Internal bar code:TCTACTCCCCAGCAAGGTGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1771
LEAP-Seq percent confirming:85.4167
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCATTGCGAAGGACATCG
Suggested primer 2:GATGGCGTTCATGTAACCGC