Insertion junction: CLIP2.054591_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054591
Chromosome:chromosome 10
Location:2417511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435200 (1 of 4) IPR000533 - Tropomyosin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGGCGGCTGAGCCGCTGAGGGGCAGACCGGGGCGCACCGTTTGTTAC
Internal bar code:TCTACTCCCCAGCAAGGTGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1948
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGCGTTCATGTAACCGC
Suggested primer 2:CTGCATTGCGAAGGACATCG