Insertion junction: CLIP2.054597_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.054597
Chromosome:chromosome 2
Location:7657552
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g147550 (1 of 2) IPR009057//IPR017877 - Homeodomain-like // Myb-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCTGGGGGCGGGGGAGGCAGGGGGCGAGCGGGAGGACTGGCCGCACC
Internal bar code:AGCCCGTGCCGCTCGGTTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1774
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GAGACCTCTGTTGCGACCAA
Suggested primer 2:CCCGGCTAAGCGTATCATGT