Insertion junction: CLIP2.054601_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054601
Chromosome:chromosome 13
Location:1125697
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569450 (1 of 1) IPR000104//IPR029058 - Antifreeze protein, type I // Alpha/Beta hydrolase fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGCGGAGCCGGCGCCATTTCGCGCGGCAGAGTTGAATGCCCTGCGTG
Internal bar code:TGTCCCGTGGATTCTGAGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1491
LEAP-Seq percent confirming:5.26316
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAGAAATGGACGCTGGA
Suggested primer 2:GGGGTTCAGGTTCAGGATGG