Insertion junction: CLIP2.054611_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054611
Chromosome:chromosome 4
Location:679830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCACACCTGAACTGCTGGGCCCAGCTTTGCCTTCCTCACGCCATACAC
Internal bar code:CGTGTTGCCAGAAAGGGCGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3180
LEAP-Seq percent confirming:38.4615
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:72
LEAP-Seq n unique pos:117

Suggested primers for confirmation by PCR

Suggested primer 1:CCTAATCCCCACACTTGCGT
Suggested primer 2:AATGCTGACGAGGCTCAACA