Insertion junction: CLIP2.054613_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054613
Chromosome:chromosome 11
Location:1215735
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467688 (1 of 1) 1.2.3.7 - Indole-3-acetaldehyde oxidase / Indoleacetaldehyde oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGCTTTGCAGCGTGGTCGTCAGTATTACGGATGTGGGTGTCAATGCT
Internal bar code:ACTGGGACTCCGAAACGGAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:775
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGCTCAAGGGGAAGGAG
Suggested primer 2:CCTCCACCTGCGATTTCAGT