Insertion junction: CLIP2.054618_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054618
Chromosome:chromosome 16
Location:2898630
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g663250 (1 of 781) IPR000104 - Antifreeze protein, type I CDS/5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCCGGCACGCCTTCCCAGGATCCCGAGCTCCGGGACATATACCTCCA
Internal bar code:TTACAGCCCCGAGGGAGTACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4550
LEAP-Seq percent confirming:59.2593
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGAGAGATGCCATGCGTC
Suggested primer 2:CGAACCGGGTTGCAATTTGT