Insertion junction: CLIP2.054618_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054618
Chromosome:chromosome 16
Location:2898631
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g663250 (1 of 781) IPR000104 - Antifreeze protein, type I CDS/5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGTGCAAGCACGCACGCTGGGGTGCCTGTCCCTGACGCCCCAGCTAA
Internal bar code:TCCGCCTAAATGAAATAACAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1396
LEAP-Seq percent confirming:98.6842
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:CGAACCGGGTTGCAATTTGT
Suggested primer 2:TCTGAGAGATGCCATGCGTC