Insertion junction: CLIP2.054619_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054619
Chromosome:chromosome 7
Location:1745354
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325719 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGGCTGGGCCTGGCAGCTAGCAGCTACTACAAGCGTCGCGCAGCCCT
Internal bar code:CTTAGGCCGTAGCTTGATTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4196
LEAP-Seq percent confirming:94.5455
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCCTTAAATGTGTCGCG
Suggested primer 2:CGTAGGTGCCACAGAGCTAG