Insertion junction: CLIP2.054622_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054622
Chromosome:chromosome 6
Location:1409132
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g259750 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCCTTTCGGCGCTCCACCGGCGGCGGTAGCGCAGGAAGCGGCGGTGG
Internal bar code:ATGGGGGTATTGGTCCCTGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2467
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGTTGAGATGTCGCGTGT
Suggested primer 2:GGGAACATCAGACACCCCAG