Insertion junction: CLIP2.054625_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054625
Chromosome:chromosome 4
Location:1673380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212550 TTL7 (1 of 1) K06047 - tubulin---tyrosine ligase [EC:6.3.2.25] (TTL); Tubulin tyrosine ligase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATACTTGCCGTGCAGGGCATTGCACCGTACCGGTACGGTGATGCGTCTG
Internal bar code:CTCGAGGTCCAAAACGTCAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2177
LEAP-Seq percent confirming:15.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTGCTGTGTGGCTGTAG
Suggested primer 2:CCAGAAGAAACCTCCCCACC