Insertion junction: CLIP2.054625_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.054625
Chromosome:chromosome 4
Location:1673386
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212550 TTL7 (1 of 1) K06047 - tubulin---tyrosine ligase [EC:6.3.2.25] (TTL); Tubulin tyrosine ligase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTATTTCGCAGCAACACCCGGCATCACTTTCTTTTGGCACTGGCACCGG
Internal bar code:CTCGAGGTCCAAAACGTCAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:640
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGAAGAAACCTCCCCACC
Suggested primer 2:TGTCTGCTGTGTGGCTGTAG