Insertion junction: CLIP2.054625_6

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.054625
Chromosome:chromosome 11
Location:2632376
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTCATTGCCAAGCGTGCTGTGGGCAACTAGTAGGTACCCACGCGCCAC
Internal bar code:CAGTGAGGCGCATCACAGAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:54
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGAGGAAGCTGAGTTGC
Suggested primer 2:GTCAACCCAGTCCCAGTCAG