Insertion junction: CLIP2.054627_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.054627
Chromosome:chromosome 13
Location:1224086
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g570250 CKIN1L,SNRK1B,CKIN2 (1 of 1) PF07714//PF14531 - Protein tyrosine kinase (Pkinase_Tyr) // Kinase-like (Kinase-like); snRK1 family in Chlamydomonas, subgroup 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGGCGCAGTCAGCCGCCTCCGCAGCCACGTCCGCCTCCACACCCGCT
Internal bar code:TTGAGGCCGTCGTGCTGTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1080
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TACACCCGAGTTGGAGATGC
Suggested primer 2:CATGTTTGGTGGCATGCAGG