Insertion junction: CLIP2.054629_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054629
Chromosome:chromosome 12
Location:9742043
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552827 (1 of 3) PTHR36732:SF1 - GLYCINE-RICH PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACACCGGCGCCGCCAGGAAGCAAGCAAGCCAACTAACGGCACCCCTGC
Internal bar code:AATTCGTCGGACTTGGTGGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3539
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCTAAGCGGTCGTGAAA
Suggested primer 2:TCTGAAAGCGCAGTACCTGG