Insertion junction: CLIP2.054640_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054640
Chromosome:chromosome 6
Location:6701500
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g295200 pCRY,PCRY1,CPH1 Plant-like Cryptochrome photoreceptor; (1 of 1) PTHR11455//PTHR11455:SF18 - CRYPTOCHROME // DEOXYRIBODIPYRIMIDINE PHOTO-LYASE, MITOCHONDRIAL CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCGTCCTGCGCGCCGGCGAACCGCGCTCGCCGTGCTCCTCATCTTCGC
Internal bar code:AACGTCCTAAAGTGTTAAACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2292
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TATGGCAGCAGCAACAGCA
Suggested primer 2:TCGACCAAGGTGTCAGAACG