Insertion junction: CLIP2.054652_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054652
Chromosome:chromosome 1
Location:5835381
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041850 (1 of 10) PTHR12270:SF6 - GLYCOSYLTRANSFERASE-LIKE PROTEIN LARGE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGTTTGGGCTGGTATCTACAACCCTCCCCTCCCTTCTCCCACGCCCCT
Internal bar code:TCGTTCTACTTTGTTGTGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:94
LEAP-Seq percent confirming:38.8889
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCGCCGACTTGATGACA
Suggested primer 2:CTTCTCCTCACCCACCCAAC