Insertion junction: CLIP2.054652_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054652
Chromosome:chromosome 1
Location:5835384
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041850 (1 of 10) PTHR12270:SF6 - GLYCOSYLTRANSFERASE-LIKE PROTEIN LARGE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACCCAATGCAATATGGGTTCAACGTTGAGCCAATCCCATAAGGAAACA
Internal bar code:ACTAGTGCTCGGTGCTAGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:322
LEAP-Seq percent confirming:53.125
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTCCTCACCCACCCAAC
Suggested primer 2:TTGTCGCCGACTTGATGACA